Educational Materials

High Content 2018 Educational Material

The SBI2 educational materials stem from the educational program delivered at the annual Society of Biomolecular Imaging and Informatics conferences.  The 2018 conference educational curriculum includes downloadable presentations on Introductory High-Content Screening/Analysis, and Advanced Elective courses.

Introduction to HCS/HCA Training Course Topics

 

Image and Data Analysis

Mark Bray (Novartis)

Assay Types and Assay Development

Joe Trask (Perkin Elmer)

 

Statistical Analysis of Screening Data

Bartek Rajwa (Purdue University)

 

Advanced Elective HCS/HCA Course Topics

New Technologies

David Andrews (University of Toronto)

Phenotypic Screening

Myles Fennel (Memorial Sloan Kettering Cancer Center)

Paul Selzer (Novartis)

Systems Biology

Steve Haney (Indiana Biosciences Research Center)

Link to be added

T-SNE and Cen-se' Mapping Methods Explained

Bruce Bagwell (Verity Software House)

Single Cell Cytometry

David Gebhard (Cytometry Consultant)

CRISPR Technology

Sam Hasson (Amgen)

Deep Learning and Machine Learning

David Egan (Core Life Sciences), Wienan Omta (Core Life Sciences), Sam Cooper (Phenomic AI), Oren Kraus (Phenomic AI), Juan Caicedo (The Broad Institute)

3D Cell Models

Paul Johnston (University of Pittsburgh), Daniel LaBarbera (University of Denver), Joe Trask (Perkin Elmer), Judi Wardwell (Insphero), Todd Shelper (Griffith University), Molly Boutin (NIH/NCATS)

 

High Content 2017 Educational Materials

The SBI2 educational materials stem from the educational program delivered at the annual Society of Biomolecular Imaging and Informatics conferences.  The 2017 conference educational curriculum includes downloadable presentations on Introductory High-Content Screening/Analysis, and Advanced Elective courses.

 

Introductory High Content Screening and Analysis Course Topics:

 

Hardware and Image Acquisition

Doug Bowman (Indica Labs)

 

Assay Development

Oscar J. Trask (Perkin Elmer)

 

Intro to HCS Image Analysis

Mark Anthony Bray (Novartis Institute of Biomedical Research)

Advanced High Content Screening and Analysis Courses:

 

New Technologies

David Andrews (University of Toronto)

Kinetic Imaging of Cancer

Lesley Griner (Novartis)

CRISPR Technology

Myles Fennell (Sloan Kettering Cancer Center)

Kaylene Simpson (Victorian Comprehensive Cancer Centre)

Sam Hasson (Pfizer)

Phenotypic Screening

Myles Fennell (Sloan Kettering Cancer Center)

Paul Selzer (Novartis)

Single Cell Cytometry

David Gebhard (Pfizer)

3D Drug Discovery

Todd Shepler (Griffith University)

Systems Biology

Steve Haney (Eli Lilly)

Assay Quality Measures

Bartek Rajwa (Purdue University)

3D Drug Discovery

Dan LaBarbera (University of Colorado )

High Content 2016 Educational Materials

The SBI2 educational materials stem from the educational program delivered at the annual Society of Biomolecular Imaging and Informatics conferences.  The 2016 conference educational curriculum includes three downloadable presentations on Introductory High-Content Screening/Analysis, six Advanced Elective courses and information on the 3D Imaging Best Practices & Unmet Needs Colloquium.

Introductory High Content Screening and Analysis Course Topics:

 

Hardware & Image Acquisition

Oscar J. Trask (Perkin Elmer)

 

Assay Types & Assay Development

Steven Haney (Eli Lilly and Co)

 

Image & Data Analysis

Mark Bray (Novartis Institute)

Advanced High Content Screening and Analysis Courses:

3d

Assay Types & Assay Development in 3D HCS

Lesley Mathews & Tamara Gilbert (Novartis)

bartek

Introduction to Multispectral Imaging

Bartek Rajwa (Purdue University)

Phenotypic Screening – Strategies and Lessons learned

Paul Selzer (Novartis)

bray2

Advanced Tools for Data Analysis:  CellProfiler

Mark Bray (Novartis)

data

 

Data Analysis in HCS:  A Practical Guide for Practitioners

Oliver Leven (Genedata), Seungtaek Lee (Perkin Elmer)

crispr

Cell Line Development Using CRISPR Technology

Samuel A. Hasson (Pfizer, Inc.)